2002–03 C.D. Marathón season

The 2002–03 C.D. Marathón season in the Honduran football league was divided into two halves, Apertura and Clausura. Marathón was capable to win one tournament, having achieved the fourth championship in their history.

Semifinals

 * Olimpia won 3-2 on aggregate.

Semifinals

 * Marathón 1–1 Real España on aggregate score; Marathón advanced on better Regular season performance.

Final

 * Marathón won 4–1 on aggregate.

Total scorers

 * Only at Clausura
 * Only at Apertura