2006 PBZ Zagreb Indoors – Doubles

The event was being held for the first time since 1997.

Jaroslav Levinský and Michal Mertiňák won the title, defeating Davide Sanguinetti and Andreas Seppi 7–6(9–7), 6–1 in the final.

Seeds
• # 🇨🇿 Petr Pála / 🇨🇿 Pavel Vízner (quarterfinals)

• # 🇨🇿 Jaroslav Levinský / 🇸🇰 Michal Mertiňák (champions)

• # 🇪🇸 David Ferrer / 🇪🇸 Feliciano López (first round)

• # 🇨🇿 Radek Štěpánek / 🇷🇺 Mikhail Youzhny (first round)