2016 Metro Atlantic Athletic Conference baseball tournament

The 2016 Metro Atlantic Athletic Conference baseball tournament was held from May 25 through 29. The top six regular season finishers of the league's eleven teams met in the double-elimination tournament, which was held at Dutchess Stadium in Wappingers Falls, New York. As tournament champion, Fairfield earned the conference's automatic bid to the 2016 NCAA Division I baseball tournament.

Seeding
The top six teams were seeded one through six based on their conference winning percentage. They then played a double-elimination tournament.

All-Tournament Team
The following players were named to the All-Tournament Team.

Most Valuable Player
Jake Salpietro was named Tournament Most Valuable Player.