FC Pune City Reserves and Academy

FC Pune City (R) was FC Pune City's reserve team that participanted in the I-League 2nd Division. FC Pune City Academy was the youth setup of FC Pune City. They participated in Youth League U18 and U15, as well as Pune Football League.

Formation
On 26 August 2016, it was announced that FC Pune City had purchased the Pune F.C. Academy and rebranded it under their name. At the same time, the team unveiled their youth development plans which included fielding teams in Youth League U18 and U15, as well as Subroto Cup and Pune Football League.

Shut down
FC Pune City Reserves and Academy got dissolved in 2019, soon after their first team FC Pune City shut down its operations due financial and technical difficulties. The club's ownership was sold. The franchise rights was bought by Hyderabad-based IT entrepreneur Vijay Madduri and former Kerala Blasters FC CEO Varun Tripuneni. They subsequently launched a new club, Hyderabad FC.

Honours

 * IFA Shield
 * Winners (1): 2017
 * Bandodkar Gold Trophy
 * Winners (1): 2016