User:IB1usea/Books/IT for bioinformatics

Web Servers and Application

 * .NET Bio
 * 2D gel analysis software
 * Abalone (molecular mechanics)
 * Affymetrix GeneChip Operating Software
 * Afroinsectiphilia
 * Align-m
 * Alignment-free sequence analysis
 * AliView
 * AlleleID
 * Alloenzyme
 * AMAP
 * AMPHORA
 * Anduril (workflow engine)
 * ANGIS
 * Animalia Paradoxa
 * ARB Project
 * Archaeopteryx (evolutionary tree visualization and analysis)
 * ARKive
 * Arlequin
 * ArrayTrack
 * Articulata hypothesis
 * AstridBio
 * Autapomorphy
 * BAli-Phy
 * BALL
 * Basal (phylogenetics)
 * Bayesian inference in phylogeny
 * Beacon designer
 * Behavior mutation
 * Bellerophon program
 * BioBIKE
 * Bioconductor
 * BioExtract
 * Bioinformatic Harvester
 * Bioinformatics workflow management system
 * BioJava
 * BioJS
 * Biological classification
 * BioNumerics
 * BioPerl
 * BioPHP
 * Biopython
 * BioRuby
 * BioSLAX
 * Biskit
 * BLAST
 * Blast2GO
 * BLAT (bioinformatics)
 * BLOSUM
 * BNAber
 * Bowtie (sequence analysis)
 * Broadly neutralizing HIV-1 antibodies
 * Caminalcules
 * Catalogue of Life
 * Cetancodontamorpha
 * Cetruminantia
 * Chemotaxonomy
 * CheShift
 * Chronospecies
 * Circumscriptional name
 * Clade
 * Cladistics
 * Cladistics (journal)
 * Cladogenesis
 * Cladogram
 * Cline (biology)
 * Clone manager
 * Clustal
 * Cn3D
 * Compositional domain
 * Computational phylogenetics
 * Computational Resource for Drug Discovery
 * Conserved name
 * Conserved sequence
 * Coot (software)
 * Covarion
 * Crown eukaryotes
 * Crown group
 * CS-BLAST
 * Cytoscape
 * DAVID (bioinformatics tool)
 * David Hillis
 * Debian-Med
 * Dendroscope
 * DIALIGN-T
 * DIALIGN-TX
 * Disk-covering method
 * Distance matrices in phylogeny
 * DNASTAR
 * ECRbase
 * EggNOG (database)
 * Elvis taxon
 * EMovie
 * Empire (program)
 * Encyclopedia of Life
 * Eocyte hypothesis
 * ETBLAST
 * Eurasian Adam
 * Evolutionary neuroscience
 * Evolutionary taxonomy
 * External transcribed spacer
 * FASTA
 * FastPCR
 * FlyExpress
 * Foldit
 * FoldX
 * Form classification
 * Formatdb
 * Galaxy (computational biology)
 * Gap penalty
 * GC-content
 * Gene Designer
 * Gene family
 * GeneMark
 * GenePattern
 * Generalized tree alignment
 * Generic Model Organism Database
 * GENESIS (software)
 * Genetic distance
 * Genetic history of Europe
 * Genevestigator
 * GenGIS
 * GenMAPP
 * GenoCAD
 * Genome diversity and karyotype evolution of mammals
 * Genomespace
 * Genomic signature
 * GENSCAN
 * GENtle
 * GESS
 * Geworkbench
 * Ghost lineage
 * Handel (bioinformatics software package)
 * Haplogroup
 * Haplogroup A-L1085
 * Harvestman phylogeny
 * HH-suite
 * HHpred / HHsearch
 * High-performance Integrated Virtual Environment
 * HMMER
 * Homology (biology)
 * Human mitochondrial molecular clock
 * HYPHY (software)
 * I-TASSER
 * Ichnotaxon
 * IMOD (software)
 * Implied weighting
 * Indigenous (ecology)
 * Informative site
 * Infraspecific name
 * Integrated Genome Browser
 * Integromics
 * Internal transcribed spacer
 * IsoBase
 * Isochore (genetics)
 * Jacques Gauthier
 * JAligner
 * Jalview
 * Jmol
 * Joseph Felsenstein
 * Jpred
 * Kepler scientific workflow system
 * Kew Rule
 * Klee diagram
 * LabKey Server
 * Last universal ancestor
 * Lazarus taxon
 * Least squares inference in phylogeny
 * Lineage (evolution)
 * List of alignment visualization software
 * List of biomedical cybernetics software
 * List of disorder prediction software
 * List of gene families
 * List of gene prediction software
 * List of molecular graphics systems
 * List of open-source bioinformatics software
 * List of phylogenetic tree visualization software
 * List of phylogenetics software
 * List of protein structure prediction software
 * List of RNA structure prediction software
 * List of sequence alignment software
 * List of systems biology visualization software
 * List of Y-DNA single-nucleotide polymorphisms
 * Long branch attraction
 * Macroscopic Observatory
 * MAFFT
 * Mascot (software)
 * Mass spectrometry data format
 * MassWiz
 * MAVID
 * Maximum clade credibility tree
 * Maximum parsimony (phylogenetics)
 * McDonald–Kreitman test
 * Median graph
 * MEGA, Molecular Evolutionary Genetics Analysis
 * Mega2, the Manipulation Environment for Genetic Analysis
 * MEGAN
 * Microbial phylogenetics
 * Mitochondrial Eve
 * MochiView
 * MODELLER
 * Models of DNA evolution
 * Molecular clock
 * Molecular phylogenetics
 * Molecular Phylogenetics and Evolution
 * MolIDE
 * Monophyly
 * Morphobank
 * Most recent common ancestor
 * Multiple sequence alignment
 * MUMmer
 * MUSCLE (alignment software)
 * NAPP (Database)
 * Needleman–Wunsch algorithm
 * Neighbor joining
 * Neighbor-net
 * Neomura
 * NoeClone
 * Nomen novum
 * Non-cellular life
 * OLIGO Primer Analysis Software
 * Omixon
 * OpenChrom
 * OpenMS
 * OrthoDB
 * Orthologous MAtrix
 * Outgroup (cladistics)
 * PANDIT (database)
 * Paraphyly
 * ParaSurf
 * Pathovar
 * PathVisio
 * PatternHunter
 * PAUP
 * PDBREPORT
 * Peramorphosis
 * Perfect phylogeny
 * Phenetics
 * PhEVER
 * Phred base calling
 * PHYLIP
 * Phylogenetic bracketing
 * Phylogenetic comparative methods
 * Phylogenetic footprinting
 * Phylogenetic network
 * Phylogenetic nomenclature
 * Phylogenetic tree
 * Phylogenetics
 * Phylogeny (psychoanalysis)
 * PhylomeDB
 * Phyloscan
 * PhyloXML
 * Phyre / Phyre2
 * Pipeline Pilot
 * PLINK (genetic tool-set)
 * Polyphenism
 * Polyphyly
 * Polytomy
 * Primer Premier
 * PrimerPlex
 * ProbCons
 * Protein subcellular localization prediction
 * Proteomics Standards Initiative
 * ProteoWizard
 * Protomap (proteomics)
 * PSI Protein Classifier
 * PSIPRED
 * PSORT
 * PupaSuite
 * Qlucore
 * Quantitative comparative linguistics
 * Quartet distance
 * Quasi-median networks
 * Quinarian system
 * QuteMol
 * RAPTOR (software)
 * RaptorX / software for protein modeling and analysis
 * RasMol
 * RedToL
 * Retrotransposon marker
 * RNA integrity number
 * Robinson–Foulds metric
 * Rosalind (education platform)
 * SAMtools
 * SAR supergroup
 * Saturation (genetic)
 * Scigress
 * Semantides
 * Sequence alignment
 * SEQUEST
 * Serotype
 * ShelXle
 * Short Oligonucleotide Analysis Package
 * Sim4
 * Simbiosys
 * Similarity matrix
 * Single-access key
 * Sirius visualization software
 * Sister group
 * Smith–Waterman algorithm
 * Snagger
 * Soaplab
 * Soft-bodied organism
 * Software for protein model error verification
 * Software for protein structure visualization
 * SPAdes (software)
 * Species name
 * Split (phylogenetics)
 * Split networks
 * SplitsTree
 * Stemloc
 * Stemmatics
 * STING
 * Stratocladistics
 * Structural alignment software
 * Substitution model
 * Superorganism
 * Supertree
 * Svenska Spindlar
 * Symplesiomorphy
 * Synapomorphy
 * Systema Naturae
 * Systematics
 * T-Coffee
 * T-REX (webserver)
 * TaveRNA
 * Taverna workbench
 * Taxon
 * Taxon in disguise
 * Taxonomy (biology)
 * The Genomic HyperBrowser
 * The Proteolysis Map
 * Three-domain system
 * Three-taxon analysis
 * TimeLogic
 * TimeTree
 * TopFIND
 * Torsion (gastropod)
 * Toxicofera
 * Trace fossil classification
 * Trans-Proteomic Pipeline
 * Transformed cladistics
 * Transitional fossil
 * Tree alignment
 * Tree of Life Web Project
 * Tree rearrangement
 * TreeFam
 * Treefinder
 * Ubuntu-Med
 * UCbase
 * UCSF Chimera
 * UGENE
 * UPGMA
 * UTOPIA (Bioinformatics tools)
 * Vector NTI
 * Velvet assembler
 * Viral phylodynamics
 * Virus classification
 * Web-based taxonomy
 * Webtag (software)
 * WHAT IF software
 * Wikispecies
 * Woeseian revolution
 * Xrate
 * Y Chromosome Consortium
 * Yass (software)
 * Zombie taxon