User:Juan Villada/Books/BIOINFORMATICS TOOLS

== INTRODUCTION TO BIOINFORMATICS TOOLS == ==Juan Villada Arteaga==Microbiologia Agricola==UFV - 2014==
 * Introduction
 * Omics
 * Bioinformatics
 * Computational biology
 * Biological database
 * National Center for Biotechnology Information
 * European Bioinformatics Institute


 * Sequence Aligment
 * Sequence alignment
 * List of sequence alignment software
 * BLAST


 * Multiple Aligment
 * Clustal
 * MUSCLE (alignment software)
 * T-Coffee


 * Phylogenetics
 * List of phylogenetics software
 * List of phylogenetic tree visualization software
 * MEGA, Molecular Evolutionary Genetics Analysis
 * PHYLIP


 * Structure Prediction
 * List of RNA structure prediction software
 * List of protein structure prediction software


 * Motif Finder
 * Multiple EM for Motif Elicitation
 * Phyloscan


 * 3D Structure
 * Structural bioinformatics


 * Open-Source Bioinformatics Software
 * List of open-source bioinformatics software
 * UGENE
 * BioPerl
 * Bioconductor
 * Biopython


 * Workflow
 * Bioinformatics workflow management system
 * Galaxy (computational biology)


 * Statistics
 * Regression analysis
 * Hidden Markov model
 * R (programming language)


 * Some Algorithms and Methods
 * Data mining
 * Sequential Pattern Mining
 * Smith–Waterman algorithm
 * Needleman–Wunsch algorithm
 * Dynamic programming
 * Cluster analysis
 * Bayesian network