User:KlumpermanVenus/sandbox

= BF9 =

Summary
Toxin BF9 is a Kunitz-type peptide, coming from snakes, with a dual functionality. The toxin is able

to inhibit both serine proteases and potassium channels (more specifically the Kv1.3 channel).

Etymology and source
Venom basic protease inhibitor IX, also named BF9, is derived from the venom of elapid snake Bungarus fasciatus. The ‘BF’ in the name originates from the snake's nomenclature. This Kunitz-type peptide is the first functionally characterized snake toxin which both inhibits Kunitz-type protease and potassium channels.

Chemistry
The protein structure of BF9 has a length of 65 amino acid residues. Three of these residues are acidic and nine are basic. The basic residues of the protein are critical in forming the ‘functional dyad', which is a well-defined pair of amino acid residues that is essential for the protein’s function. This ‘functional dyad’ is necessary to affect potassium channels. The amino acid sequence of BF9 is the following:

‘KNRPTFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCAAKYGRSS’.

Target & Mode of action
For the recognition of Kv1 potassium channels, the Kunitz-type toxins from snakes mainly use N-terminal residues. To interact specifically with the Kv1.3 channels, based on sequence and structural comparative analyses with other Kunitz-type toxins, it is suggested for BF9 that it uses both its N-terminal and C-terminal residues. The N-terminal residues involved are K1, R3, F6, L9 and L10. The C-terminal residues that are involved are R55, K60 and K63. These residues together form a molecular mechanism to interact with Kv1.3 channels. Due to this interaction, BF9 blocks half of the maximum Kv1.3 channel activity with an IC50 value of 120.0 nM.

Besides blocking Kv1.3 potassium channels, BF9  also acts as a serine protease inhibitor by interacting with specific proteases, such as alpha-chymotrypsin. This inhibition is achieved by BF9 cleaving Asn17 at the P1 site of the target peptide. This P1 site of the target peptide interacts with the active site of a protease. BF9 is the first identified toxin that is capable of inhibiting both potassium channels and serine protease.

Therapeutic use
Kv1.3 channels are among others expressed in T-cells. Therefore, if these channels are inhibited, the effector-memory T-cells are affected.

The overexpression of Kv1.3 channels in T-cells can lead to autoimmune diseases, and a higher level of factor XIa can lead to thrombosis.   Using its properties, BF9 can potentially be used for a treatment drug which targets the Kv1.3 channels and the XIa coregulation factor.