User:Manudouz/sandbox/CAT Model

CAT is a model of DNA and protein sequence evolution.

Reduction of long-branch attraction
CAT reduces long-branch attraction artefacts.

Acoelomorphs
Symsagittifera : Parsimony versus CAT.

Xenacoelomorpha sister group to Nephrozoa.

Turtles
Elucidation of the phylogenetic position of turtles among sauropsids.

Ciliates

 * Unravelling the deep phylogenetic relationships among major ciliate lineages + the position of Protocruzia.


 * Convergent evolution in ciliates.

Mitochondria origin
Phylogenomic analyses indicate that mitochondria evolved from a proteobacteria lineage that branched off before the divergence of all sampled alphaproteobacteria.

Archaea
Supermatrix of proteins.

2D Tree of life
Concatenation of 35 core protein-coding genes. "We find that eukaryotes consistently originate from within the archaea in a two-domains tree when due consideration is given to the fit between model and data".

Redirect
Phylobayes
 * 1) REDIRECT CAT model