User:Reo On/Books/statistics for tree construction


 * intro
 * Prosecutor's fallacy


 * phylogenetic methods
 * Bayesian inference
 * Computational phylogenetics
 * Maximum likelihood
 * Maximum parsimony
 * Neighbor-joining
 * Quasi-maximum likelihood
 * UPGMA


 * markov and bayes
 * Likelihood function
 * Markov process
 * Markov chain
 * Markov chain Monte Carlo
 * Monte Carlo method


 * notes for study
 * Algorithm
 * Bayes' theorem
 * Bias of an estimator
 * Binomial distribution
 * Conditional probability
 * Covariance matrix
 * Entropy
 * Expected value
 * Fisher information
 * German tank problem
 * Gibbs sampling
 * Heuristic
 * Integral
 * Matrix
 * NP-hard
 * Outgroup
 * Posterior probability
 * Probability density function
 * Probability distribution
 * Range (mathematics)
 * Statistical inference
 * Tree (data structure)


 * Programs and data standards
 * Newick format
 * PHYLIP