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Symbiosis
Symbionts are the primary providers of nutrition for Osedax. However, these symbionts also possess genes, secretion systems, and toxins that disrupt the Osedax membrane and facilitate recurrent infections of adult Osedax through the root tips. There is ongoing debate in the literature over whether the symbiosis in Osedax roots is commensal or mutualistic. The symbiotic relationship between Osedax and its accompanying bacteria may be transferred either via vertical or horizontal transmission.

The Oceanospirillales symbionts are found in the specialized roots of all Osedax species, and play a major role in accelerating the degradation process of bones, as well as facilitating nutrient uptake for the Osedax. Oceanospirillales are known for their ability to degrade complex organic compounds.

Osedax species use collagen, which is the primary organic component in bone. Collagen is degraded using a family of endopeptidases called matrix metalloproteinases (MMPs), which facilitates nutrient absorption by the Osedax. The roots of the Osedax express high amounts of V-ATPase and carbonic anhydrase enzymes, which allows the Osedax to dissolve and absorb collagen and lipids. Once dissolved, the nutrients are either used by the Osedax, or transported to the symbionts for further catabolism.

As the endosymbionts lack secreted M9 peptidase, they rely on the Osedax worm to source extracellular collagen. The symbionts in the Oceanospirillales order have then been observed to further process the collagen using collagenolytic enzymes.

Sequencing of the Osedax worm genome has suggested an evolved dependency on its endosymbionts. This is revealed by genomic streamlining, where increased functional groups were observed despite the loss of some gene families. Six incomplete pathways were discovered in the Osedax worm genome which were supplemented by the endosymbionts. In particular, the Osedax worm lacks specific gene families involved in bone lipid and carbohydrate metabolism. This function is complemented by the Oceanospirillales symbionts, which utilize the glyoxylate cycle to catabolize nutrients from whale bones and convert fatty acids into carbohydrates. The Osedax are then able to take up and store the end products as glycogen. Bacteriocytes are present in the Osedax lower trunk subepidermal connective tissue, and there are additional genes in the bacteriocytes that encode amino acids and glucose and aid in digestion and absorption of proteins into the roots.

Campylobacterales are abundant along the trunk of the Osedax according to a 2023 study. Different genera in this order are found in Osedax at different points during the whale’s degradation:


 * 1) Members of the Arcobacter genus are the primary early colonizers (<24 months).
 * 2) Sulfurospirillum genus members colonize at ~50 months, during the transitional stages of organic carbon breakdown.
 * 3) The Sulfurimonas genus dominates at >140 months, and are key players in its symbiosis with the Osedax host.

The Sulfurimonas genus in particular protects the Osedax worms from potentially harmful by-products produced at >140 months of the whale fall degradation. The Sulfurimonas bacteria house the type II and IV sulfide:quinone oxidoreductase genes that encode enzymes to oxidize and assimilate sulfide. These reactions prevent the host from absorbing toxic by-products across the epithelial barrier.