User talk:Dgary0202

Welcome!
Hello, Dgary0202, and welcome to Wikipedia! My name is Ian and I work with the Wiki Education Foundation; I help support students who are editing as part of a class assignment.

I hope you enjoy editing here. If you haven't already done so, please check out the student training library, which introduces you to editing and Wikipedia's core principles. You may also want to check out the Teahouse, a community of Wikipedia editors dedicated to helping new users. Below are some resources to help you get started editing. If you have any questions, please don't hesitate to contact me on my talk page. Ian (Wiki Ed) (talk) 15:47, 26 January 2018 (UTC)

Topics
My topic will be Proteogenomics

List of Possible topics- Assignment 3

1. Proteogenomics

2. Infrared photodissociation spectroscopy

3. Proton-transfer-reaction mass spectrometry

4. Isobaric labeling

5. Ion-mobility spectrometry–mass spectrometry

Articles list
The list of possible articles to edit is here: Wikipedia talk:Wiki Ed/Louisiana State University/Chemistry 4558 Mass Spectrometry (Spring 2018). Check for possible conflicts. mke sure that your list is on your talk page so that I can leave comments on your choices. --Kkmurray (talk) 18:01, 13 February 2018 (UTC)

My Outline and Description
I plan to expand on the introduction, methodology, and applications sections and to create a new section discussing the challenges of proteogeonomics.

Outline: 1.Introduction- The introduction section needs to be expanded Proteonomics assumes that current gene models are correct and that the correct protein sequences can be found using a reference protein sequence data base. This is not always the case as novel proteins sequences can occur through mutations, but this issue can be fixed with the use of genomic data.
 * Proteogenomic has applications outside of improving gene annotations
 * Proteogeonomics also Incorporates transcrptiomics

2. Mehtodology
 * In proteogeonmics, geonomic and transcription information is considered and included in the protein sequence data base, where it can be compared with MS spectra to aid in the identification of peptides
 * Peptide classes identified by proteogeonomics
 * I will discuss the main two classes of peptides and how proteogenomics and how the customizable protein data base can be used for peptide/protein identification

3. Applications- I will add additional information
 * Quantitative proteogeonomics
 * Oncology Research- I will briefly explain how genomics was used to study cancer causing mutations and how it was realized that proteins plays a role in cancer as well, leading to proteomic research

4. Challenges- I will add a new section that provides information regarding the different challenges of proteogeonomics
 * Miss identifying new peptides due to the large amount of data being analyzed, such errors of false discovery are a concern
 * Mass spec issues- volume of data and the amount of time it takes to produce spectra
 * Computational issues

Speedy deletion nomination of Proteogeonomics
Hello Dgary0202,

I wanted to let you know that I just tagged Proteogeonomics for deletion, because it appears to duplicate an existing Wikipedia article, Proteogenomics.

If you feel that the article shouldn't be deleted, you can [//en.wikipedia.org/w/index.php?title=&action=edit&section=new&preload=Template:Hangon_preload&preloadtitle=This+page+should+not+be+speedy+deleted+because...+ contest this deletion], but please don't remove the speedy deletion tag from the top.

You can leave a note on my talk page if you have questions.

Hzh (talk) 14:32, 11 March 2018 (UTC)

Proteogeonomics
Please note that there is no such thing as proteogeonomics, it is merely a mispelling of proteogenomics. Hzh (talk) 14:42, 11 March 2018 (UTC)