User talk:Lindhc47

PDB structures
Hi,

What PDB structure did you use to create File:Neuropilin.png? This needs to be documented.

Also, are your edits part of a class? If so, I would really appreciate if your instructor would contact me. I have a lot of hints that would save both the students and me a lot of work. Thanks. Boghog (talk) 20:57, 17 November 2010 (UTC)


 * OK, I now see that the graphic is derived from . But I would still appreciate if your instructor would contact me.  Thanks.  Boghog (talk) 21:00, 17 November 2010 (UTC)

Hi,

Can you please wait until tuesday to delete my ramachandran plot link? this is a class assignment, and it was recommended that we add a link for this.

Thank you!

and thanks for helping me edit this!


 * OK, but I really, really, really would appreciate if you would ask your instructor to contact me. This type of link, unless it is discussed in the text of the article is not appropriate for a Wikipedia article. Thanks.  Boghog (talk) 23:49, 21 November 2010 (UTC)

If I talked about the significance of the plot would that make it more appropriate?

I sent her an email and gave her your username.


 * Thanks for forwarding my name to your instructor. Ramachandran plot give a quick overview of the conformations of the protein backbone.  This might be interesting if parts of the structure fall out side of the "allowed" regions.  This would indicate that these parts of the structure adopt an unusual strained conformation or alternatively there is a problem in the refinement of the structure.  According to the pdf link, the only outlier is A 106 PRO (-30.4, 118.4). Take a look at the original paper and see if the authors talk about Ramachandran plot or strained regions in the structure.  Boghog (talk) 00:05, 22 November 2010 (UTC)