List of biomedical cybernetics software

The following is a list of software packages and applications for biocybernetics research.

Data formats and specifications

 * Systems Biology Markup Language (SBML)
 * Biological Pathway Exchange (BioPAX)
 * CellML
 * Minimum Information About a Simulation Experiment (MIASE)
 * Minimum information required in the annotation of models (MIRIAM)
 * Systems Biology Ontology (SBO)
 * Systems Biology Graphical Notation (SBGN)

Libraries for software development

 * CyberUnits, a class library for computer simulations in life sciences

Software products

 * SimThyr – Simulation system for thyroid homeostasis

Other collections

 * PhysioToolkit Software Index: PhysioNet's software collection