1999 US Open – Girls' doubles

Kim Clijsters and Eva Dyrberg were the defending champions, but they did not compete in the Junior's this year.

First seeds Dája Bedáňová and Iroda Tulyaganova won in the final, 6–3, 6–4, against unseeded Russians Galina Fokina and Lina Krasnoroutskaya.

Seeds
• # 🇨🇿 Dája Bedáňová / 🇺🇿 Iroda Tulyaganova (champions)

• # 🇸🇰 Katarína Bašternáková / 🇸🇰 Stanislava Hrozenská (semifinals)

• # Eleni Daniilidou / 🇫🇷 Virginie Razzano (semifinals)

• # 🇺🇸 Ansley Cargill / 🇺🇸 Laura Granville (quarterfinals, withdrew)

• # Laura Bao / 🇬🇧 Hannah Collin (first round)

• # 🇨🇿 Eva Birnerová / Aniela Mojzis (quarterfinals)

• # 🇸🇰 Lenka Dlhopolcová / 🇸🇰 Ľubomíra Kurhajcová (second round)

• # Michelle Gerards /  Natalie Grandin (second round)